Curated BLAST for Genomes

 

Curated BLAST

Searching in Teredinibacter turnerae T7901 (GCF_000023025.1)

Found 51 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).

These curated entries have 38 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Teredinibacter turnerae T7901, or try another query

thrH TERTU_RS07730 TERTU_1745 WP_015816867.1: bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH
is similar to:
PaperBLAST

THRH_PSEAE / Q9I2Y2: Phosphoserine phosphatase ThrH; PSP; PSPase; EC 3.1.3.3 from Pseudomonas aeruginosa

75% id,
100% cov

THRH_PSESM / Q883R9: Phosphoserine phosphatase; PSP; PSPase; EC 3.1.3.3 from Pseudomonas syringae

74% id,
86% cov

serB TERTU_RS02885 TERTU_0663 WP_015817102.1: phosphoserine phosphatase SerB
is similar to:
PaperBLAST

SERB_IDILO / Q5QXU4: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Idiomarina loihiensis

47% id,
94% cov

SERB_POLSJ / Q12A06: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Polaromonas sp.

49% id,
89% cov

SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis

44% id,
99% cov

More...

serA TERTU_RS01735 TERTU_0393 WP_015820139.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

53% id,
65% cov

CA265_RS22635: phosphoserine phosphatase (EC 3.1.3.3) from Pedobacter sp.

37% id,
25% cov

TERTU_RS16035 TERTU_3617 WP_015818282.1: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPB_HYDTT / D3DFP8: Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFP8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

31% id,
88% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

25% id,
70% cov

TERTU_RS02870 TERTU_0659 WP_015820278.1: alkaline phosphatase
is similar to:
PaperBLAST

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

33% id,
78% cov

TERTU_RS12210 TERTU_2766 WP_015820769.1: TIGR01458 family HAD-type hydrolase
is similar to:
PaperBLAST

ARAL_BACSU / P94526: Sugar-phosphatase AraL; Arabinose operon protein AraL; Phosphoserine phosphatase; EC 3.1.3.23; EC 3.1.3.3 from Bacillus subtilis

27% id,
92% cov

PSP_BACSU / P94512: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Bacillus subtilis

29% id,
28% cov

TERTU_RS01600 TERTU_0360 WP_041590012.1: HAD family hydrolase
is similar to:
PaperBLAST

SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus

26% id,
90% cov

SERB1_MYCTU / P9WGJ3: Phosphoserine phosphatase SerB1; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Mycobacterium tuberculosis

32% id,
72% cov

SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis

24% id,
89% cov

More...

gpmA TERTU_RS19655 TERTU_4427 WP_015820577.1: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
is similar to:
PaperBLAST

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

27% id,
74% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

33% id,
53% cov

TERTU_RS12140 TERTU_2749 WP_015818019.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

32% id,
58% cov

TERTU_RS05955 TERTU_1346 WP_015817189.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

22% id,
70% cov

TERTU_RS13975 TERTU_3161 WP_015817161.1: 2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

28% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory