Curated BLAST for Genomes

 

Curated BLAST

Searching in Teredinibacter turnerae T7901 (GCF_000023025.1)

Found 45 curated entries in PaperBLAST's database that match '4.4.1.13' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Teredinibacter turnerae T7901, or try another query

TERTU_RS11015 TERTU_2486 WP_015819756.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

METC_COXBU / Q83A83: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Coxiella burnetii

 40% id,
98% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 41% id,
94% cov

B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 38% id,
96% cov

More...

cysM TERTU_RS05310 TERTU_1192 WP_015817634.1: cysteine synthase CysM
is similar to:		 PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

 41% id,
65% cov

cysK TERTU_RS17835 TERTU_4014 WP_015819991.1: cysteine synthase A
is similar to:		 PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

 35% id,
66% cov

TERTU_RS17330 TERTU_3906 WP_015819661.1: cysteine synthase family protein
is similar to:		 PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

 34% id,
66% cov

TERTU_RS05030 TERTU_1132 WP_015816931.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

SUR1 / Q9SIV0: alkyl-thiohydroximate C-S lyase (EC 4.4.1.13) from Arabidopsis thaliana

 27% id,
81% cov

Q84UD0: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); L-cystine beta-lyase (EC 4.4.1.35) from Brassica oleracea

 26% id,
83% cov

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

 23% id,
93% cov

More...

cobD TERTU_RS14710 TERTU_3321 WP_015818523.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

MALY_ECOLI / P23256: Protein MalY; EC 4.4.1.13 from Escherichia coli
MalY / b1622: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
malY / P23256: negative regulator of MalT activity/cystathionine β-lyase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

 24% id,
46% cov

SUR1 / Q9SIV0: alkyl-thiohydroximate C-S lyase (EC 4.4.1.13) from Arabidopsis thaliana

 24% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory