Curated BLAST for Genomes

 

Curated BLAST

Searching in Teredinibacter turnerae T7901 (GCF_000023025.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Teredinibacter turnerae T7901, or try another query

trpE TERTU_RS13865 TERTU_3137 WP_015816820.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

53% id,
98% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

47% id,
96% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

44% id,
96% cov

More...

pabB TERTU_RS13165 TERTU_2979 WP_015820714.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

31% id,
97% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

31% id,
94% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

31% id,
95% cov

More...

TERTU_RS18045 TERTU_4059 WP_015819844.1: isochorismate synthase
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

29% id,
67% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

29% id,
56% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

28% id,
58% cov

More...

TERTU_RS12055 TERTU_2729 WP_015819873.1: isochorismate synthase
is similar to:
PaperBLAST

TRPE_YEAST / P00899: Anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Saccharomyces cerevisiae

30% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory