Curated BLAST for Genomes

 

Curated BLAST

Searching in Teredinibacter turnerae T7901 (GCF_000023025.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Teredinibacter turnerae T7901, or try another query

TERTU_RS13840 TERTU_3129 WP_015819494.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

62% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

60% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

46% id,
99% cov

pabB TERTU_RS13165 TERTU_2979 WP_015820714.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

44% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

40% id,
100% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

41% id,
96% cov

guaA TERTU_RS11555 TERTU_2615 WP_015820453.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

27% id,
99% cov

carA TERTU_RS14580 TERTU_3293 WP_041590260.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
93% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
84% cov

hisH TERTU_RS05765 TERTU_1304 WP_015820889.1: imidazole glycerol phosphate synthase subunit HisH
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

38% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory