Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium leguminosarum bv. trifolii WSM1325 (GCF_000023185.1)

Found 28 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhizobium leguminosarum bv. trifolii WSM1325, or try another query

RLEG_RS00240 Rleg_0048 WP_012755791.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

pta / Q9F1X6: phosphotransacetylase (EC 2.3.1.8) from Fructilactobacillus sanfranciscensis

34% id,
97% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

34% id,
97% cov

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

32% id,
98% cov

More...

RLEG_RS10915 Rleg_2206 WP_012757690.1: NADP-dependent malic enzyme
is similar to:
PaperBLAST

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

30% id,
99% cov

B2RK03: phosphate acetyltransferase (EC 2.3.1.8) from Porphyromonas gingivalis

31% id,
96% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

29% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory