Searching in Rhizobium leguminosarum bv. trifolii WSM1325 (GCF_000023185.1)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Rhizobium leguminosarum bv. trifolii WSM1325, or try another query
| gguC RLEG_RS15655 Rleg_3172 WP_012758575.1: GguC family protein is similar to: | PaperBLAST |
SM_b20892: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Sinorhizobium meliloti | 77% id, 100% cov |
AO356_24595: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens | 56% id, 95% cov |
Pf1N1B4_4623: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) from Pseudomonas fluorescens | 55% id, 98% cov |
| RLEG_RS19585 Rleg_3957 WP_012759263.1: dihydrodipicolinate synthase family protein is similar to: | PaperBLAST |
HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae | 34% id, 96% cov |
Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp. | 33% id, 90% cov |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 33% id, 88% cov |
| dapA RLEG_RS05610 Rleg_1142 WP_012756782.1: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 27% id, 94% cov |
| RLEG_RS13790 Rleg_2793 WP_012758228.1: dihydrodipicolinate synthase family protein is similar to: | PaperBLAST |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 25% id, 97% cov |
| RLEG_RS33140 Rleg_6099 WP_012760000.1: fumarylacetoacetate hydrolase family protein is similar to: | PaperBLAST |
xacE / D4GP28: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43; EC 4.2.1.141) from Haloferax volcanii | 32% id, 67% cov |
| RLEG_RS21170 Rleg_4276 WP_012759554.1: fumarylacetoacetate hydrolase family protein is similar to: | PaperBLAST |
xacE / D4GP28: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43; EC 4.2.1.141) from Haloferax volcanii | 31% id, 68% cov |
| RLEG_RS23690 Rleg_4773 WP_012755232.1: dihydrodipicolinate synthase family protein is similar to: | PaperBLAST |
BPHYT_RS22715: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Burkholderia phytofirmans | 28% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory