Searching in Rhizobium leguminosarum bv. trifolii WSM1325 (GCF_000023185.1)
Found 20 curated entries in PaperBLAST's database that match '5.4.2.7' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Rhizobium leguminosarum bv. trifolii WSM1325, or try another query
| RLEG_RS22180 Rleg_4469 WP_012759723.1: phosphopentomutase is similar to: | PaperBLAST |
SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis | 57% id, 100% cov |
DEOB_ECOLI / P0A6K6: Phosphopentomutase; Phosphodeoxyribomutase; Phosphoribomutase; EC 5.4.2.7 from Escherichia coli | 57% id, 100% cov |
Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae | 55% id, 100% cov |
| glmM RLEG_RS17235 Rleg_3490 WP_003542705.1: phosphoglucosamine mutase is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 29% id, 98% cov |
PGM3_YEAST / Q03262: Phosphoribomutase; PRM; Phosphoglucomutase 3; PGM 3; EC 5.4.2.7 from Saccharomyces cerevisiae | 25% id, 48% cov |
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens | 30% id, 18% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory