Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium leguminosarum bv. trifolii WSM1325 (GCF_000023185.1)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhizobium leguminosarum bv. trifolii WSM1325, or try another query

RLEG_RS15200 Rleg_3078 WP_012758490.1: anthranilate synthase
is similar to:
PaperBLAST

TRPE_SERMA / P00897: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Serratia marcescens

30% id,
98% cov

TRPE_ECOLI / P00895: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Escherichia coli

31% id,
88% cov

TRPE_SALTY / P00898: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Salmonella typhimurium

31% id,
88% cov

More...

RLEG_RS17770 Rleg_3598 WP_012758933.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

35% id,
64% cov

TRPE_ECOLI / P00895: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Escherichia coli

29% id,
70% cov

TRPE_YEAST / P00899: Anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Saccharomyces cerevisiae

37% id,
50% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory