Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium leguminosarum bv. trifolii WSM1325 (GCF_000023185.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhizobium leguminosarum bv. trifolii WSM1325, or try another query

RLEG_RS15200 Rleg_3078 WP_012758490.1: anthranilate synthase
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

41% id,
99% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

37% id,
93% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

35% id,
99% cov

carA RLEG_RS14640 Rleg_2965 WP_011652894.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

34% id,
91% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

29% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory