Curated BLAST
Searching in Acidimicrobium ferrooxidans DSM 10331 (GCF_000023265.1)
Found 10 curated entries in PaperBLAST's database that match '2.3.1.223' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Acidimicrobium ferrooxidans DSM 10331, or try another query
AFER_RS07055 Afer_1370 WP_015798780.1: acetyl-CoA C-acyltransferase is similar to: | PaperBLAST |
PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli | 62% id, 99% cov |
paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp. Q845J8: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223) from Pseudomonas sp. | 61% id, 99% cov |
H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila | 59% id, 99% cov |
BPHYT_RS17345: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Burkholderia phytofirmans | 58% id, 99% cov |
HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae | 58% id, 100% cov |
ACAA1 / P09110: 3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.223; EC 2.3.1.16) from Homo sapiens | 40% id, 90% cov |
POT1 / P27796: 3-oxoacyl CoA thiolase (EC 2.3.1.16; EC 2.3.1.223) from Saccharomyces cerevisiae | 46% id, 55% cov |
More... |
AFER_RS01350 Afer_0261 WP_015797735.1: acetyl-CoA C-acyltransferase is similar to: | PaperBLAST |
PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli | 47% id, 100% cov |
paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp. Q845J8: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223) from Pseudomonas sp. | 46% id, 100% cov |
HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae | 46% id, 100% cov |
H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila | 44% id, 100% cov |
BPHYT_RS17345: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Burkholderia phytofirmans | 44% id, 100% cov |
ACAA1 / P09110: 3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.223; EC 2.3.1.16) from Homo sapiens | 42% id, 91% cov |
POT1 / P27796: 3-oxoacyl CoA thiolase (EC 2.3.1.16; EC 2.3.1.223) from Saccharomyces cerevisiae | 39% id, 91% cov |
More... |
AFER_RS00420 Afer_0085 WP_012784175.1: thiolase family protein is similar to: | PaperBLAST |
paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp. Q845J8: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223) from Pseudomonas sp. | 47% id, 100% cov |
PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli | 46% id, 100% cov |
H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila | 45% id, 100% cov |
HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae | 45% id, 100% cov |
BPHYT_RS17345: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Burkholderia phytofirmans | 44% id, 100% cov |
ACAA1 / P09110: 3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.223; EC 2.3.1.16) from Homo sapiens | 41% id, 91% cov |
POT1 / P27796: 3-oxoacyl CoA thiolase (EC 2.3.1.16; EC 2.3.1.223) from Saccharomyces cerevisiae | 38% id, 91% cov |
More... |
AFER_RS00545 Afer_0106 WP_012784196.1: acetyl-CoA C-acetyltransferase is similar to: | PaperBLAST |
paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp. Q845J8: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223) from Pseudomonas sp. | 40% id, 100% cov |
PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli | 39% id, 100% cov |
HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae | 38% id, 99% cov |
H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila | 38% id, 100% cov |
BPHYT_RS17345: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Burkholderia phytofirmans | 37% id, 100% cov |
ACAA1 / P09110: 3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.223; EC 2.3.1.16) from Homo sapiens | 39% id, 91% cov |
POT1 / P27796: 3-oxoacyl CoA thiolase (EC 2.3.1.16; EC 2.3.1.223) from Saccharomyces cerevisiae | 35% id, 90% cov |
POT1 / P27796: 3-oxoacyl CoA thiolase (EC 2.3.1.16; EC 2.3.1.223) from Saccharomyces cerevisiae | 31% id, 29% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory