Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Acidimicrobium ferrooxidans DSM 10331 (GCF_000023265.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Acidimicrobium ferrooxidans DSM 10331, or try another query

AFER_RS07955 Afer_1537 WP_015798939.1: branched-chain amino acid transaminase is similar to:	PaperBLAST
ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa	50% id, 99% cov
BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans	50% id, 99% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	50% id, 99% cov
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli ilvE / RF\|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli	49% id, 100% cov
Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri	49% id, 99% cov
N515DRAFT_2015: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica	46% id, 97% cov
F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis	45% id, 99% cov
F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia	44% id, 96% cov
B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum	44% id, 96% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	42% id, 97% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	42% id, 97% cov
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	39% id, 95% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	40% id, 92% cov
D1CCW1: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermobaculum terrenum	38% id, 95% cov
P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.	37% id, 96% cov
D0LR31: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Haliangium ochraceum	36% id, 95% cov
A6UP94: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus vannielii	34% id, 99% cov
ILVE_MYCTU / P9WQ75: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycobacterium tuberculosis P9WQ75: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycobacterium tuberculosis	34% id, 86% cov
ILVE_MYCS2 / A0R066: Branched-chain-amino-acid aminotransferase; BCAT; EC 2.6.1.42 from Mycolicibacterium smegmatis A0R066: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Mycolicibacterium smegmatis	33% id, 86% cov
RR42_RS25890: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Cupriavidus basilensis	30% id, 88% cov
A0A2Z4MEX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Brevibacillus brevis	29% id, 90% cov
ILVE1_BACSU / O31461: Branched-chain-amino-acid transaminase 1; BCAT 1; EC 2.6.1.42 from Bacillus subtilis ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis	31% id, 84% cov
Q9LE06: branched-chain-amino-acid transaminase (EC 2.6.1.42); methionine transaminase (EC 2.6.1.88) from Arabidopsis thaliana	30% id, 86% cov
Q5FTR3: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Gluconobacter oxydans	30% id, 82% cov
Q70KX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Hordeum vulgare	30% id, 77% cov
ILVE2_BACSU / P39576: Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 from Bacillus subtilis ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis	27% id, 86% cov
Q9LPM9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	29% id, 78% cov
Q9FYA6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	30% id, 73% cov
BCAT2_HUMLU / K7QHS5: Branched-chain amino acid aminotransferase 2, chloroplastic; HlBCAT2; EC 2.6.1.42 from Humulus lupulus	30% id, 73% cov
BCAT3_ARATH / Q9M401: Branched-chain-amino-acid aminotransferase 3, chloroplastic; Atbcat-3; EC 2.6.1.42; EC 2.6.1.88 from Arabidopsis thaliana Q9M401: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	32% id, 69% cov
BCAT2_ARATH / Q9M439: Branched-chain-amino-acid aminotransferase 2, chloroplastic; Atbcat-2; EC 2.6.1.42 from Arabidopsis thaliana Q9M439: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	27% id, 79% cov
A0A0A0KG15: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	31% id, 65% cov
B6RFK8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Nicotiana benthamiana	32% id, 62% cov
BCAT1_HUMLU / K7QKH1: Branched-chain amino acid aminotransferase 1, mitochondrial; HlBCAT1; EC 2.6.1.42 from Humulus lupulus	30% id, 67% cov
BCA1_YEAST / P38891: Branched-chain-amino-acid aminotransferase, mitochondrial; BCAT; Protein ECA39; Protein TWT1; EC 2.6.1.42 from Saccharomyces cerevisiae BAT1 / P38891: branched-chain amino acid aminotransferase subunit (EC 2.6.1.42; EC 2.6.1.6) from Saccharomyces cerevisiae P38891: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Saccharomyces cerevisiae	28% id, 71% cov
Q93Y32: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	28% id, 68% cov
A0A0A0LN48: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	26% id, 69% cov
BCAT_CAEEL / P54688: Branched-chain-amino-acid aminotransferase, cytosolic; BCAT; ECA39 protein; EC 2.6.1.42 from Caenorhabditis elegans	25% id, 67% cov
A0A0A0LJI6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	33% id, 50% cov
More...

AFER_RS04840 Afer_0940 WP_015798368.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme is similar to:	PaperBLAST
TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli	23% id, 65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

698409-699326 (frame +3) on NC_013124.1 Acidimicrobium ferrooxidans DSM 10331, complete sequence is similar to:	PaperBLAST
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica Also see hits to annotated proteins above	33% id, 95% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis Also see hits to annotated proteins above	32% id, 96% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus Also see hits to annotated proteins above	32% id, 96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory