Curated BLAST for Genomes

 

Curated BLAST

Searching in Acidimicrobium ferrooxidans DSM 10331 (GCF_000023265.1)

Found 60 curated entries in PaperBLAST's database that match 'Serine hydroxymethyltransferase' as complete word(s).

These curated entries have 48 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Acidimicrobium ferrooxidans DSM 10331, or try another query

glyA AFER_RS09320 Afer_1805 WP_280956798.1: serine hydroxymethyltransferase
is similar to:
PaperBLAST

2dkjA / Q5SI56: Crystal structure of t.Th.Hb8 serine hydroxymethyltransferase

58% id,
100% cov

1kkjA / Q7SIB6: Crystal structure of serine hydroxymethyltransferase from b.Stearothermophilus

58% id,
99% cov

GLYA_THET8 / Q5SI56: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Thermus thermophilus

58% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory