Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermomonospora curvata DSM 43183 (GCF_000024385.1)

Found 10 curated entries in PaperBLAST's database that match '1.1.1.23' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thermomonospora curvata DSM 43183, or try another query

hisD TCUR_RS27545 Tcur_2897 WP_012853226.1: histidinol dehydrogenase
is similar to:
PaperBLAST

HISX_MYCTU / P9WNW9: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis
P9WNW9: histidinol dehydrogenase (EC 1.1.1.23) from Mycobacterium tuberculosis

66% id,
98% cov

Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis

42% id,
93% cov

HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium

36% id,
97% cov

More...

hisI TCUR_RS14205 Tcur_2879 WP_041441860.1: phosphoribosyl-AMP cyclohydrolase
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

33% id,
14% cov

A1BPP9: histidinol dehydrogenase (EC 1.1.1.23) from Geotrichum candidum

29% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory