Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Thermomonospora curvata DSM 43183 (GCF_000024385.1)

Found 26 curated entries in PaperBLAST's database that match '1.13.11.27' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thermomonospora curvata DSM 43183, or try another query

hppD TCUR_RS05240 Tcur_1062 WP_245536986.1: 4-hydroxyphenylpyruvate dioxygenase is similar to:	PaperBLAST
HPPD_STRAW / Q53586: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Streptomyces avermitilis	73% id, 94% cov
Q6KZ98: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Picrophilus torridus	48% id, 94% cov
HPPD1_ASPFU / Q4WHU1: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; L-tyrosine degradation gene cluster protein hppD; Pyomelanin biosynthesis cluster protein hppD; EC 1.13.11.27 from Aspergillus fumigatus	47% id, 93% cov
HPPD_CAEEL / Q22633: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Caenorhabditis elegans	45% id, 93% cov
HPPD_HUMAN / P32754: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Homo sapiens HPD / P32754: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Homo sapiens P32754: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Homo sapiens	45% id, 92% cov
HPPD_RAT / P32755: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; F Alloantigen; F protein; EC 1.13.11.27 from Rattus norvegicus P32755: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Rattus norvegicus	45% id, 92% cov
HPPD_PIG / Q02110: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Sus scrofa	41% id, 92% cov
LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila	35% id, 94% cov
Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri	35% id, 91% cov
AO356_22845: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	35% id, 86% cov
Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	35% id, 86% cov
P80064: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Pseudomonas sp. P80064: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	35% id, 87% cov
A0A1S5V3J7: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Medicago sativa	34% id, 89% cov
HPPD_ARATH / P93836: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Arabidopsis thaliana	35% id, 87% cov
AO353_26925: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	34% id, 86% cov
PfGW456L13_2935: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens	34% id, 86% cov
Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp.	36% id, 81% cov
Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from uncultured soil	38% id, 76% cov
SO1962: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis Q8EFK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis	33% id, 86% cov
C7S313: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Salvia miltiorrhiza	35% id, 79% cov
hppD / Q55810: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Synechocystis sp.	35% id, 56% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1214595-1215725 (frame -2) on NC_013510.1 Thermomonospora curvata DSM 43183, complete sequence is similar to:	PaperBLAST
HPPD_STRAW / Q53586: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Streptomyces avermitilis Also see hits to annotated proteins above	73% id, 97% cov
Q6KZ98: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Picrophilus torridus Also see hits to annotated proteins above	45% id, 100% cov
HPPD_CAEEL / Q22633: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Caenorhabditis elegans Also see hits to annotated proteins above	45% id, 97% cov
HPPD_HUMAN / P32754: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Homo sapiens HPD / P32754: 4-hydroxyphenylpyruvate dioxygenase subunit (EC 1.13.11.27) from Homo sapiens P32754: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Homo sapiens Also see hits to annotated proteins above	44% id, 97% cov
LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila Also see hits to annotated proteins above	34% id, 97% cov
Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri Also see hits to annotated proteins above	34% id, 94% cov
A0A1S5V3J7: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Medicago sativa Also see hits to annotated proteins above	34% id, 92% cov
HPPD_ARATH / P93836: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Arabidopsis thaliana Also see hits to annotated proteins above	35% id, 89% cov
C7S313: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Salvia miltiorrhiza Also see hits to annotated proteins above	36% id, 81% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory