Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermomonospora curvata DSM 43183 (GCF_000024385.1)

Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thermomonospora curvata DSM 43183, or try another query

metH TCUR_RS11345 Tcur_2292 WP_012852642.1: methionine synthase
is similar to:
PaperBLAST

metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum

63% id,
99% cov

METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli

33% id,
97% cov

DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris

31% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory