Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermomonospora curvata DSM 43183 (GCF_000024385.1)

Found 23 curated entries in PaperBLAST's database that match '6.1.1.23' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Thermomonospora curvata DSM 43183, or try another query

aspS TCUR_RS10525 Tcur_2128 WP_012852478.1: aspartate--tRNA ligase
is similar to:		 PaperBLAST

Synpcc7942_1313: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Synechococcus elongatus

 50% id,
98% cov

aspS / P21889: aspartate—tRNA ligase (EC 6.1.1.12; EC 6.1.1.23) from Escherichia coli

 48% id,
99% cov

Q9KDG1: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Alkalihalobacillus halodurans

 48% id,
99% cov

More...

aspS TCUR_RS10510 Tcur_2124 WP_206664192.1: aspartate--tRNA(Asn) ligase
is similar to:		 PaperBLAST

SYDND_DEIRA / Q9RVH4: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase 2; AspRS2; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Deinococcus radiodurans
aspS2 / Q9RVH4: aspartyl-tRNA synthetase, non-discriminating (EC 6.1.1.23) from Deinococcus radiodurans

 39% id,
100% cov

SYDND_HALSA / O07683: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Halobacterium salinarum
O07683: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Halobacterium salinarum

 38% id,
100% cov

SYDND_THET8 / Q5SIC2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase 2; AspRS2; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Thermus thermophilus

 38% id,
100% cov

More...

lysX TCUR_RS22050 Tcur_4482 WP_012854792.1: bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
is similar to:		 PaperBLAST

SYDND_HALSA / O07683: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Halobacterium salinarum
O07683: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Halobacterium salinarum

 29% id,
97% cov

SYDND_METMA / Q8Q0R2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanosarcina mazei

 27% id,
98% cov

O32038: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bacillus subtilis

 27% id,
52% cov

More...

lysX TCUR_RS19520 Tcur_3970 WP_012854283.1: bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
is similar to:		 PaperBLAST

SYDND_HALSA / O07683: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Halobacterium salinarum
O07683: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Halobacterium salinarum

 28% id,
97% cov

SYDND_METMA / Q8Q0R2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanosarcina mazei

 25% id,
98% cov

SYDND_METTH / O26328: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanothermobacter thermautotrophicus
O26328: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Methanothermobacter thermautotrophicus

 25% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory