Curated BLAST for Genomes

 

Curated BLAST

Searching in Ammonifex degensii KC4 (GCF_000024605.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Ammonifex degensii KC4, or try another query

ADEG_RS04485 Adeg_0882 WP_015738897.1: homoserine dehydrogenase
is similar to:		 PaperBLAST

D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus

 49% id,
97% cov

DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum
P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum

 49% id,
96% cov

P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae

 47% id,
98% cov

More...

ADEG_RS04495 Adeg_0884 WP_015738899.1: aspartate kinase
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

 45% id,
54% cov

BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron

 31% id,
49% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

 34% id,
44% cov

More...

proB ADEG_RS00925 Adeg_0186 WP_015738236.1: glutamate 5-kinase
is similar to:		 PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

 23% id,
31% cov

AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

 24% id,
23% cov

AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

 22% id,
23% cov

More...

ADEG_RS00120 Adeg_0027 WP_012818184.1: CBS domain-containing protein
is similar to:		 PaperBLAST

DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum
P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum

 33% id,
15% cov

ADEG_RS05810 Adeg_1150 WP_015739145.1: prephenate dehydrogenase
is similar to:		 PaperBLAST

P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae

 28% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory