Curated BLAST for Genomes

 

Curated BLAST

Searching in Ammonifex degensii KC4 (GCF_000024605.1)

Found 33 curated entries in PaperBLAST's database that match '4.2.1.51' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Ammonifex degensii KC4, or try another query

pheA ADEG_RS05820 Adeg_1153 WP_015739147.1: prephenate dehydratase
is similar to:
PaperBLAST

Q8DUV6: prephenate dehydratase (EC 4.2.1.51) from Streptococcus mutans

42% id,
98% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC 4.2.1.51 from Methanocaldococcus jannaschii

40% id,
99% cov

PHEA_MYCBO / Q7TVJ6: Prephenate dehydratase; PDT; EC 4.2.1.51 from Mycobacterium bovis
PHEA_MYCTU / P9WIC3: Prephenate dehydratase; PDT; EC 4.2.1.51 from Mycobacterium tuberculosis
P9WIC3: prephenate dehydratase (EC 4.2.1.51) from Mycobacterium tuberculosis

37% id,
87% cov

More...

ADEG_RS10370 Adeg_2053 WP_015740007.1: basic amino acid ABC transporter substrate-binding protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

26% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory