Curated BLAST for Genomes

 

Curated BLAST

Searching in Ammonifex degensii KC4 (GCF_000024605.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Ammonifex degensii KC4, or try another query

ADEG_RS09235 Adeg_1828 WP_015739791.1: argininosuccinate synthase
is similar to:
PaperBLAST

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus

61% id,
98% cov

H9BG20: argininosuccinate synthase (EC 6.3.4.5) from Leishmania donovani

60% id,
94% cov

A4I066: argininosuccinate synthase (EC 6.3.4.5) from Leishmania infantum

60% id,
94% cov

More...

ADEG_RS00845 Adeg_0170 WP_015738220.1: ATP-binding protein
is similar to:
PaperBLAST

S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens

40% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory