Curated BLAST for Genomes

 

Curated BLAST

Searching in Ammonifex degensii KC4 (GCF_000024605.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Ammonifex degensii KC4, or try another query

trpE ADEG_RS05865 Adeg_1162 WP_015739156.1: anthranilate synthase component I
is similar to:
PaperBLAST

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

47% id,
97% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

47% id,
96% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

46% id,
97% cov

More...

ADEG_RS01960 Adeg_0391 WP_015738422.1: chorismate-binding protein
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

33% id,
54% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

33% id,
53% cov

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

31% id,
55% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory