Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 11 curated entries in PaperBLAST's database that match '2.3.1.174' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Klebsiella variicola At-22, or try another query

pcaF KVAR_RS14340 Kvar_2889 WP_008805117.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli
YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli
paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli

85% id,
100% cov

paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp.

71% id,
100% cov

H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila

69% id,
100% cov

More...

pcaF KVAR_RS13980 Kvar_2817 WP_008805052.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae

77% id,
100% cov

pcaF / Q0K4S3: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Cupriavidus necator

72% id,
100% cov

BPHYT_RS17345: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Burkholderia phytofirmans

72% id,
100% cov

More...

KVAR_RS11065 Kvar_2219 WP_012967979.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp.

49% id,
100% cov

Tfu_0875 / Q47RK4: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Thermobifida fusca

47% id,
100% cov

H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila

47% id,
100% cov

More...

fadA KVAR_RS24490 Kvar_4893 WP_008807927.1: acetyl-CoA C-acyltransferase FadA
is similar to:
PaperBLAST

HSERO_RS20660: bifunctional thiolase PaaJ: 3-oxo-5,6-dehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Herbaspirillum seropedicae

47% id,
100% cov

paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp.

46% id,
100% cov

Tfu_0875 / Q47RK4: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Thermobifida fusca

45% id,
100% cov

More...

KVAR_RS04020 Kvar_0802 WP_008806357.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp.

47% id,
100% cov

PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli
YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli
paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli

45% id,
100% cov

H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila

45% id,
100% cov

More...

KVAR_RS14245 Kvar_2870 WP_012968353.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

44% id,
100% cov

H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila

43% id,
100% cov

Tfu_0875 / Q47RK4: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Thermobifida fusca

43% id,
99% cov

More...

fadI KVAR_RS06700 Kvar_1325 WP_008803904.1: acetyl-CoA C-acyltransferase FadI
is similar to:
PaperBLAST

Tfu_0875 / Q47RK4: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Thermobifida fusca

33% id,
99% cov

PAAJ_ECOLI / P0C7L2: 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli
YdbW / b1397: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli
paaJ / P0C7L2: β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli

33% id,
98% cov

pcaF / Q0K4S3: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Cupriavidus necator

32% id,
98% cov

More...

fabF KVAR_RS12605 Kvar_2535 WP_008804821.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

paaJ / Q845J8: β-ketoadipyl-CoA thiolase (EC 2.3.1.174; EC 2.3.1.223) from Pseudomonas sp.

26% id,
40% cov

pcaF / Q0K4S3: 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Cupriavidus necator

39% id,
14% cov

H281DRAFT_05723: bifunctional thiolase PaaJ: 3-oxo-5,6-didehydrosuberyl-CoA thiolase (EC 2.3.1.223); 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) from Paraburkholderia bryophila

37% id,
14% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory