Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 36 curated entries in PaperBLAST's database that match '2.6.1.83' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Klebsiella variicola At-22, or try another query

alaC KVAR_RS06645 Kvar_1315 WP_008803894.1: alanine transaminase
is similar to:		 PaperBLAST

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 43% id,
97% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 41% id,
99% cov

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

 41% id,
97% cov

More...

KVAR_RS14595 Kvar_2940 WP_012968383.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus

 40% id,
100% cov

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 39% id,
97% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 38% id,
97% cov

More...

KVAR_RS20445 Kvar_4111 WP_004222844.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 31% id,
99% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 30% id,
98% cov

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 31% id,
97% cov

More...

KVAR_RS08425 Kvar_1674 WP_012541202.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 30% id,
97% cov

Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 29% id,
100% cov

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

 26% id,
99% cov

More...

KVAR_RS15690 Kvar_3162 WP_012968507.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 29% id,
98% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 28% id,
98% cov

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 27% id,
97% cov

More...

alaA KVAR_RS06940 Kvar_1373 WP_008803944.1: alanine transaminase AlaA
is similar to:		 PaperBLAST

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 27% id,
95% cov

DAPAT_CHLTR / O84395: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Chlamydia trachomatis
O84395: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydia trachomatis

 25% id,
91% cov

Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 21% id,
98% cov

More...

KVAR_RS18515 Kvar_3722 WP_162499994.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans
A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans

 27% id,
92% cov

O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus

 25% id,
98% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 28% id,
84% cov

More...

KVAR_RS22455 Kvar_4502 WP_012969021.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 25% id,
93% cov

KVAR_RS19615 Kvar_3943 WP_012968814.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

DAPAT_METTH / O26158: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanothermobacter thermautotrophicus
O26158: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanothermobacter thermautotrophicus

 28% id,
71% cov

hisC KVAR_RS07950 Kvar_1578 WP_012967604.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

DAPAT_PARUW / Q6MDE0: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Protochlamydia amoebophila
Q6MDE0: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Candidatus Protochlamydia

 23% id,
71% cov

DAPAT_ACET2 / A3DK17: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Acetivibrio thermocellus

 24% id,
61% cov

DAPAT_METTH / O26158: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanothermobacter thermautotrophicus
O26158: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanothermobacter thermautotrophicus

 24% id,
60% cov

More...

cobD KVAR_RS04245 Kvar_0846 WP_012967290.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

DAPAT_CHLTR / O84395: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Chlamydia trachomatis
O84395: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydia trachomatis

 27% id,
56% cov

A0A6P3CW87: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Verrucomicrobium spinosum

 26% id,
56% cov

Q3MAL4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 24% id,
54% cov

More...

KVAR_RS18920 Kvar_3803 WP_012968745.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

DAPAT_CHLTR / O84395: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Chlamydia trachomatis
O84395: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydia trachomatis

 29% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory