Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 3 curated entries in PaperBLAST's database that match '3.5.1.47' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Klebsiella variicola At-22, or try another query

KVAR_RS11965 Kvar_2405 WP_012968083.1: M20 peptidase aminoacylase family protein
is similar to:
PaperBLAST

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

38% id,
99% cov

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

36% id,
99% cov

KVAR_RS10890 Kvar_2183 WP_008804517.1: M20 aminoacylase family protein
is similar to:
PaperBLAST

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

36% id,
96% cov

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

34% id,
96% cov

KVAR_RS19155 Kvar_3851 WP_012542544.1: M20 aminoacylase family protein
is similar to:
PaperBLAST

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

34% id,
97% cov

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

33% id,
91% cov

KVAR_RS08400 Kvar_1669 WP_012967651.1: amidohydrolase
is similar to:
PaperBLAST

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

33% id,
96% cov

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

31% id,
94% cov

KVAR_RS14965 Kvar_3014 WP_008805236.1: M20 aminoacylase family protein
is similar to:
PaperBLAST

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

34% id,
91% cov

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

33% id,
91% cov

KVAR_RS22420 Kvar_4494 WP_032732454.1: M20 peptidase aminoacylase family protein
is similar to:
PaperBLAST

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

27% id,
94% cov

KVAR_RS14010 Kvar_2823 WP_012968332.1: M20 family metallo-hydrolase
is similar to:
PaperBLAST

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC 3.5.1.47) from Bacillus subtilis

27% id,
86% cov

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC 3.5.1.47 from Priestia megaterium

29% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory