Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 7 curated entries in PaperBLAST's database that match '4.1.1.44' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Klebsiella variicola At-22, or try another query

pcaC KVAR_RS13965 Kvar_2814 WP_012968329.1: 4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

DC4C_PSEPU / P00881: 4-carboxymuconolactone decarboxylase; CMD; EC 4.1.1.44 from Pseudomonas putida

63% id,
100% cov

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

42% id,
98% cov

Q6SJA7: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sulfitobacter sp.

41% id,
100% cov

More...

KVAR_RS03760 Kvar_0752 WP_012967250.1: carboxymuconolactone decarboxylase family protein
is similar to:
PaperBLAST

Q9L5B1: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sagittula stellata

28% id,
98% cov

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

27% id,
94% cov

Q6SJC5: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Roseovarius nubinhibens

34% id,
65% cov

More...

KVAR_RS13355 Kvar_2686 WP_008804942.1: carboxymuconolactone decarboxylase family protein
is similar to:
PaperBLAST

Q6SJA7: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sulfitobacter sp.

41% id,
68% cov

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

42% id,
64% cov

Q6SJC5: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Roseovarius nubinhibens

41% id,
63% cov

More...

pcaD KVAR_RS13970 Kvar_2815 WP_012968330.1: 3-oxoadipate enol-lactonase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

40% id,
64% cov

KVAR_RS11260 Kvar_2260 WP_012968009.1: carboxymuconolactone decarboxylase family protein
is similar to:
PaperBLAST

Q9L5B1: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sagittula stellata

25% id,
82% cov

Q6SJB9: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi

29% id,
68% cov

Q6SJC5: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Roseovarius nubinhibens

29% id,
63% cov

More...

mhpC KVAR_RS10750 Kvar_2155 WP_012541410.1: 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

27% id,
61% cov

KVAR_RS25000 Kvar_4983 WP_008807865.1: carboxymuconolactone decarboxylase family protein
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

36% id,
28% cov

ybfF KVAR_RS18180 Kvar_3662 WP_008805666.1: esterase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

35% id,
24% cov

KVAR_RS08190 Kvar_1628 WP_008804155.1: alpha/beta hydrolase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

26% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory