Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 8 curated entries in PaperBLAST's database that match '4.1.1.77' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Klebsiella variicola At-22, or try another query

hpaH KVAR_RS22275 Kvar_4468 WP_002887487.1: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
is similar to:
PaperBLAST

Q1XGK3: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Pseudomonas putida

38% id,
98% cov

B0VXM8: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Geobacillus stearothermophilus

40% id,
94% cov

xylI / P49155: 4-oxalocrotonate decarboxylase subunit (EC 4.1.1.77) from Pseudomonas putida

38% id,
98% cov

More...

mhpD KVAR_RS10755 Kvar_2156 WP_012967940.1: 2-keto-4-pentenoate hydratase
is similar to:
PaperBLAST

xylI / P49155: 4-oxalocrotonate decarboxylase subunit (EC 4.1.1.77) from Pseudomonas putida

35% id,
96% cov

AMNE_PSESP / Q9KWS3: 4-oxalocrotonate decarboxylase; EC 4.1.1.77 from Pseudomonas sp.
amnE / Q9KWS3: 4-oxalocrotonate decarboxylase monomer (EC 4.1.1.77) from Pseudomonas sp.

33% id,
100% cov

praD / C4TP06: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Paenibacillus sp.

34% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory