Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Klebsiella variicola At-22, or try another query

gstA KVAR_RS12595 Kvar_2533 WP_008804819.1: glutathione transferase GstA
is similar to:
PaperBLAST

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
98% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
96% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

24% id,
98% cov

KVAR_RS01155 Kvar_0234 WP_012540364.1: glutathione S-transferase
is similar to:
PaperBLAST

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

26% id,
73% cov

sspA KVAR_RS02345 Kvar_0471 WP_002918467.1: stringent starvation protein SspA
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

36% id,
52% cov

KVAR_RS00790 Kvar_0162 WP_004145238.1: glutathione S-transferase
is similar to:
PaperBLAST

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

34% id,
48% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

29% id,
48% cov

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

29% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory