Curated BLAST for Genomes

 

Curated BLAST

Searching in Klebsiella variicola At-22 (GCF_000025465.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Klebsiella variicola At-22, or try another query

argG KVAR_RS02585 Kvar_0518 WP_008806631.1: argininosuccinate synthase
is similar to:
PaperBLAST

ASSY_ECOLI / P0A6E4: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Escherichia coli
ArgG / b3172: argininosuccinate synthetase (EC 6.3.4.5) from Escherichia coli

95% id,
100% cov

ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermotoga maritima

31% id,
97% cov

Q2Z0F6: argininosuccinate synthase (EC 6.3.4.5) from Agaricus bisporus

29% id,
97% cov

More...

mnmA KVAR_RS16045 Kvar_3238 WP_012542211.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to:
PaperBLAST

ARG1: argininosuccinate synthase; EC 6.3.4.5 from Candida albicans

43% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory