Curated BLAST for Genomes

 

Curated BLAST

Searching in Allochromatium vinosum DSM 180 (GCF_000025485.1)

Found 38 curated entries in PaperBLAST's database that match '2.3.1.46' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Allochromatium vinosum DSM 180, or try another query

ALVIN_RS12450 Alvin_2493 WP_012971675.1: homoserine O-succinyltransferase
is similar to:
PaperBLAST

METAS_ALLVD / D3RNP0: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Allochromatium vinosum

100% id,
100% cov

METAS_THIND / L0E1U3: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Thioalkalivibrio nitratireducens

71% id,
99% cov

METAS_NITOC / Q3J7P0: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Nitrosococcus oceani

70% id,
99% cov

More...

bioH ALVIN_RS02615 Alvin_0524 WP_012969757.1: pimeloyl-ACP methyl ester esterase BioH
is similar to:
PaperBLAST

METXS_BORPD / A9I0E6: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Bordetella petrii

35% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory