Curated BLAST for Genomes

 

Curated BLAST

Searching in Allochromatium vinosum DSM 180 (GCF_000025485.1)

Found 5 curated entries in PaperBLAST's database that match '2.7.2.17' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Allochromatium vinosum DSM 180, or try another query

argB ALVIN_RS14940 Alvin_2995 WP_012972161.1: acetylglutamate kinase
is similar to:
PaperBLAST

lysZ / Q5SH27: [LysW]-L-2-aminoadipate 6-kinase monomer (EC 2.7.2.17) from Thermus thermophilus

31% id,
100% cov

LYSZ_THET2 / O50147: [LysW]-aminoadipate kinase; EC 2.7.2.17 from Thermus thermophilus

31% id,
100% cov

argA ALVIN_RS07685 Alvin_1553 WP_012970760.1: amino-acid N-acetyltransferase
is similar to:
PaperBLAST

LYSZ_THET2 / O50147: [LysW]-aminoadipate kinase; EC 2.7.2.17 from Thermus thermophilus

23% id,
99% cov

lysZ / Q5SH27: [LysW]-L-2-aminoadipate 6-kinase monomer (EC 2.7.2.17) from Thermus thermophilus

23% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory