Searching in Allochromatium vinosum DSM 180 (GCF_000025485.1)
Found 13 curated entries in PaperBLAST's database that match '5.1.1.7' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Allochromatium vinosum DSM 180, or try another query
| dapF ALVIN_RS10415 Alvin_2089 WP_012971283.1: diaminopimelate epimerase is similar to: | PaperBLAST |
DAPF_ECOLI / P0A6K1: Diaminopimelate epimerase; DAP epimerase; PLP-independent amino acid racemase; EC 5.1.1.7 from Escherichia coli | 58% id, 100% cov |
DAPF_HAEIN / P44859: Diaminopimelate epimerase; DAP epimerase; PLP-independent amino acid racemase; EC 5.1.1.7 from Haemophilus influenzae | 57% id, 99% cov |
DAPF_BACAN / Q81XR2: Diaminopimelate epimerase; DAP epimerase; PLP-independent amino acid racemase; EC 5.1.1.7 from Bacillus anthracis | 40% id, 99% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory