Curated BLAST for Genomes

 

Curated BLAST

Searching in Allochromatium vinosum DSM 180 (GCF_000025485.1)

Found 3 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit C' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Allochromatium vinosum DSM 180, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3230488-3230991 (frame -2) on NC_013851.1 Allochromatium vinosum DSM 180, complete sequence
is similar to:
PaperBLAST

GATC_STRP6 / Q5XAC6: Glutamyl-tRNA(Gln) amidotransferase subunit C; Glu-ADT subunit C; EC 6.3.5.- from Streptococcus pyogenes

26% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory