Curated BLAST for Genomes

 

Curated BLAST

Searching in Ferroglobus placidus DSM 10642 (GCF_000025505.1)

Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Ferroglobus placidus DSM 10642, or try another query

FERP_RS00025 Ferp_0005 WP_012964546.1: shikimate kinase
is similar to:
PaperBLAST

AROK_METJA / Q58835: Shikimate kinase; SK; EC 2.7.1.71 from Methanocaldococcus jannaschii
aroK / Q58835: shikimate kinase (EC 2.7.1.71) from Methanocaldococcus jannaschii

38% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory