Curated BLAST for Genomes

 

Curated BLAST

Searching in Ferroglobus placidus DSM 10642 (GCF_000025505.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Ferroglobus placidus DSM 10642, or try another query

FERP_RS04025 Ferp_0804 WP_012965315.1: aspartate kinase
is similar to:
PaperBLAST

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

48% id,
99% cov

Q9RUL9: aspartate kinase (EC 2.7.2.4) from Deinococcus radiodurans

41% id,
96% cov

AK2_BACSU / P08495: Aspartokinase 2; Aspartate kinase 2; Aspartokinase II; EC 2.7.2.4 from Bacillus subtilis
lysC / GB|CAA99580.1: aspartate kinase 2; EC 2.7.2.4 from Bacillus subtilis
lysCα / P08495: aspartate kinase II α subunit (EC 2.7.2.4) from Bacillus subtilis
lysCβ / P08495: aspartate kinase II β subunit (EC 2.7.2.4) from Bacillus subtilis
P08495: aspartate kinase (EC 2.7.2.4) from Bacillus subtilis

33% id,
93% cov

More...

lysA FERP_RS04045 Ferp_0808 WP_012965319.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

37% id,
42% cov

FERP_RS00305 Ferp_0062 WP_012964601.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

35% id,
41% cov

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

27% id,
43% cov

ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
P00561: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Escherichia coli

26% id,
42% cov

More...

pyrH FERP_RS05485 Ferp_1101 WP_012965603.1: UMP kinase
is similar to:
PaperBLAST

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

27% id,
46% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

23% id,
48% cov

AK_YEAST / P10869: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Saccharomyces cerevisiae
P10869: aspartate kinase (EC 2.7.2.4) from Saccharomyces cerevisiae

30% id,
36% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory