Curated BLAST for Genomes

 

Curated BLAST

Searching in Ferroglobus placidus DSM 10642 (GCF_000025505.1)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Ferroglobus placidus DSM 10642, or try another query

carA FERP_RS01625 Ferp_0318 WP_012964845.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

41% id,
96% cov

FERP_RS04035 Ferp_0806 WP_012965317.1: GMP synthase subunit A
is similar to:
PaperBLAST

carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum

30% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory