Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermocrinis albus DSM 14484 (GCF_000025605.1)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thermocrinis albus DSM 14484, or try another query

hisC THAL_RS01625 Thal_0328 WP_012991370.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

37% id,
99% cov

HIS8_THEMA / Q9X0D0: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Thermotoga maritima

36% id,
97% cov

2f8jA / Q9X0D0: Crystal structure of histidinol-phosphate aminotransferase (ec 2.6.1.9) (imidazole acetol-phosphate transferase) (tm1040) from thermotoga maritima at 2.40 a resolution

36% id,
97% cov

More...

THAL_RS07720 Thal_1518 WP_012992553.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

28% id,
98% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

26% id,
99% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

27% id,
90% cov

More...

THAL_RS01260 Thal_0256 WP_012991298.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

24% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory