Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermocrinis albus DSM 14484 (GCF_000025605.1)

Found 7 curated entries in PaperBLAST's database that match '4.2.1.116' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thermocrinis albus DSM 14484, or try another query

acs THAL_RS03950 Thal_0782 WP_012991821.1: acetate--CoA ligase
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

31% id,
31% cov

fabG THAL_RS03265 Thal_0648 WP_012991688.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

36% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory