Curated BLAST for Genomes

 

Curated BLAST

Searching in Denitrovibrio acetiphilus DSM 12809 (GCF_000025725.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Denitrovibrio acetiphilus DSM 12809, or try another query

DACET_RS01590 Dacet_0318 WP_013009663.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

43% id,
95% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

42% id,
95% cov

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

40% id,
95% cov

More...

hemL DACET_RS02325 Dacet_0461 WP_013009803.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

27% id,
98% cov

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

30% id,
88% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

33% id,
78% cov

More...

bioA DACET_RS05585 Dacet_1109 WP_013010405.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

29% id,
89% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

29% id,
89% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

29% id,
55% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

332181-333500 (frame -1) on NC_013943.1 Denitrovibrio acetiphilus DSM 12809, complete sequence
is similar to:
PaperBLAST

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens
Also see hits to annotated proteins above

41% id,
99% cov

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis
Also see hits to annotated proteins above

40% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory