Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.383' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

ilvC DP_RS18905 DP0726 WP_011187971.1: ketol-acid reductoisomerase
is similar to:		 PaperBLAST

P05793: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Escherichia coli

 78% id,
46% cov

A0KS29: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Shewanella sp.

 76% id,
46% cov

ILVC_SYNWW / Q0AV19: Ketol-acid reductoisomerase (NAD(P)(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.383 from Syntrophomonas wolfei

 42% id,
60% cov

More...

DP_RS18910 DP0727 WP_011187972.1: ketol-acid reductoisomerase
is similar to:		 PaperBLAST

P05793: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Escherichia coli

 63% id,
54% cov

A0KS29: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Shewanella sp.

 63% id,
54% cov

Q02138: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383) from Lactococcus lactis

 31% id,
53% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory