Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 10 curated entries in PaperBLAST's database that match '2.3.1.117' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

lpxD DP_RS14905 DP2945 WP_041278880.1: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
is similar to:
PaperBLAST

Q8NRE3: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Corynebacterium glutamicum

27% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory