Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

DP_RS00965 DP0192 WP_011187437.1: branched-chain amino acid aminotransferase
is similar to:		 PaperBLAST

ILVE2_BACSU / P39576: Branched-chain-amino-acid aminotransferase 2; BCAT 2; Vegetative protein 85; VEG85; EC 2.6.1.42 from Bacillus subtilis
ilvK / P39576: branched-chain amino acid aminotransferase (EC 2.6.1.42; EC 2.6.1.6) from Bacillus subtilis

 54% id,
97% cov

A0A2Z4MEX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Brevibacillus brevis

 52% id,
99% cov

ILVE1_BACSU / O31461: Branched-chain-amino-acid transaminase 1; BCAT 1; EC 2.6.1.42 from Bacillus subtilis
ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis

 51% id,
100% cov

More...

DP_RS03070 DP0617 WP_011187862.1: amino acid aminotransferase
is similar to:		 PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

 45% id,
100% cov

DP_RS08170 DP1610 WP_011188851.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 42% id,
96% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

 41% id,
96% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

 40% id,
94% cov

More...

DP_RS00415 DP0085 WP_041277432.1: aminotransferase class IV
is similar to:		 PaperBLAST

F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis

 31% id,
94% cov

BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans

 31% id,
91% cov

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

 31% id,
90% cov

DP_RS14870 DP2938 WP_011190179.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

 24% id,
87% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

 23% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory