Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 22 curated entries in PaperBLAST's database that match '2.7.2.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

proB DP_RS13145 DP2589 WP_041278024.1: glutamate 5-kinase
is similar to:
PaperBLAST

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

42% id,
98% cov

G5K_LEIDO / A0A0R6Y3I5: Glutamate 5-kinase; LdG5K; Gamma-glutamyl kinase; EC 2.7.2.11 from Leishmania donovani
A0A0R6Y3I5: glutamate 5-kinase (EC 2.7.2.11) from Leishmania donovani

39% id,
97% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

38% id,
99% cov

More...

DP_RS13140 DP2588 WP_011189829.1: glutamate-5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

36% id,
56% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

35% id,
56% cov

P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens
ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC 1.2.1.41; EC 2.7.2.11) from Homo sapiens

37% id,
52% cov

More...

DP_RS00735 DP0145 WP_011187390.1: uridine monophosphate kinase
is similar to:
PaperBLAST

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

33% id,
28% cov

pyrH DP_RS05820 DP1156 WP_011188397.1: UMP kinase
is similar to:
PaperBLAST

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

36% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory