Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

DP_RS12420 DP2457 WP_041277980.1: aldolase
is similar to:
PaperBLAST

DKFP_METJA / Q58980: Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase; DKFP synthase; Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 2.2.1.11; EC 4.1.2.13 from Methanocaldococcus jannaschii
MJ1585 / Q58980: fructose 1,6-bisphosphate aldolase monomer (EC 2.2.1.11; EC 4.1.2.13) from Methanocaldococcus jannaschii

63% id,
96% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

35% id,
94% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

31% id,
99% cov

More...

DP_RS13790 DP2717 WP_011189958.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

Q5HE75: fructose-bisphosphate aldolase (EC 4.1.2.13) from Staphylococcus aureus

28% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory