Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 15 curated entries in PaperBLAST's database that match '4.1.2.48' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

ltaE DP_RS05040 DP1003 WP_041278382.1: low-specificity L-threonine aldolase
is similar to:
PaperBLAST

LTAE_ECOLI / P75823: Low specificity L-threonine aldolase; Low specificity L-TA; EC 4.1.2.48 from Escherichia coli
LtaA / b0870: low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49) from Escherichia coli
ltaE / P75823: low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.26) from Escherichia coli
P75823: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli

59% id,
97% cov

ltaA / O07051: L-allo-threonine aldolase subunit (EC 4.1.2.48) from Aeromonas jandaei

55% id,
100% cov

THA2_ARATH / Q9FPH3: Probable low-specificity L-threonine aldolase 2; Threonine aldolase 2; EC 4.1.2.48 from Arabidopsis thaliana

44% id,
96% cov

More...

glyA DP_RS09575 DP1875 WP_041277854.1: serine hydroxymethyltransferase
is similar to:
PaperBLAST

GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus

54% id,
99% cov

P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli

54% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory