Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfotalea psychrophila LSv54 (GCF_000025945.1)

Found 7 curated entries in PaperBLAST's database that match '4.1.2.5' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfotalea psychrophila LSv54, or try another query

ltaE DP_RS05040 DP1003 WP_041278382.1: low-specificity L-threonine aldolase
is similar to:
PaperBLAST

LtaA / b0870: low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49) from Escherichia coli
itaE / GB|BAA20882.1: threonine aldolase; EC 4.1.2.5 from Escherichia coli

59% id,
97% cov

Q9X266: L-threonine aldolase (EC 4.1.2.5) from Thermotoga maritima

46% id,
97% cov

GLY1 / GB|AAA72430.1: threonine aldolase; EC 4.1.2.5 from Saccharomyces cerevisiae

38% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory