Curated BLAST for Genomes

 

Curated BLAST

Searching in Azoarcus olearius BH72 (GCF_000061505.1)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.38' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azoarcus olearius BH72, or try another query

argC AZO_RS19650 azo3916 WP_011767638.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

SMc01801: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Sinorhizobium meliloti

48% id,
99% cov

Ga0059261_0351: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Sphingomonas koreensis

49% id,
96% cov

CA265_RS18540: N-succinylglutamylphosphate reductase (EC 1.2.1.38) from Pedobacter sp.

28% id,
95% cov

More...

argB AZO_RS16300 azo3244 WP_011766967.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

29% id,
33% cov

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

29% id,
30% cov

argA AZO_RS14225 azo2830 WP_011766556.1: amino-acid N-acetyltransferase
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

25% id,
33% cov

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

22% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3574554-3575576 (frame +3) on NC_008702.1 Azoarcus olearius, complete sequence
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

29% id,
34% cov

3108251-3109729 (frame -3) on NC_008702.1 Azoarcus olearius, complete sequence
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

21% id,
42% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory