Curated BLAST for Genomes

 

Curated BLAST

Searching in Azoarcus olearius BH72 (GCF_000061505.1)

Found 1 curated entries in PaperBLAST's database that match '2.3.1.182' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Azoarcus olearius BH72, or try another query

AZO_RS15865 azo3162 WP_011766887.1: 2-isopropylmalate synthase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

31% id,
100% cov

nifV AZO_RS02775 azo0551 WP_011764286.1: homocitrate synthase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

34% id,
73% cov

leuA AZO_RS17695 azo3523 WP_011767245.1: 2-isopropylmalate synthase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

28% id,
53% cov

AZO_RS15395 azo3065 WP_011766790.1: hydroxymethylglutaryl-CoA lyase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

24% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory