Curated BLAST for Genomes

 

Curated BLAST

Searching in Azoarcus olearius BH72 (GCF_000061505.1)

Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Azoarcus olearius BH72, or try another query

AZO_RS18300 azo3645 WP_041642861.1: shikimate kinase
is similar to:		 PaperBLAST

A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii

 52% id,
93% cov

AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli
AroK / b3390: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
aroK / P0A6D7: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
P0A6D7: shikimate kinase (EC 2.7.1.71) from Escherichia coli

 45% id,
96% cov

AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis
P9WPY3: shikimate kinase (EC 2.7.1.71) from Mycobacterium tuberculosis

 41% id,
93% cov

More...

AZO_RS15345 azo3055 WP_011766780.1: helix-turn-helix transcriptional regulator
is similar to:		 PaperBLAST

CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus

 35% id,
85% cov

AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis
P9WPY3: shikimate kinase (EC 2.7.1.71) from Mycobacterium tuberculosis

 33% id,
84% cov

AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli
AroK / b3390: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
aroK / P0A6D7: shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli
P0A6D7: shikimate kinase (EC 2.7.1.71) from Escherichia coli

 30% id,
91% cov

More...

AZO_RS05430 azo1071 WP_041642367.1: bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase
is similar to:		 PaperBLAST

ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae
ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae

 37% id,
32% cov

ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans
aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans

 37% id,
32% cov

aroB AZO_RS18295 azo3644 WP_011767366.1: 3-dehydroquinate synthase
is similar to:		 PaperBLAST

ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans
aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans

 42% id,
21% cov

ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae
ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae

 36% id,
15% cov

lon AZO_RS10450 azo2069 WP_041643585.1: endopeptidase La
is similar to:		 PaperBLAST

AROL_ECOLI / P0A6E1: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Escherichia coli
AroL / b0388: shikimate kinase 2 (EC 2.7.1.71) from Escherichia coli
aroL / P0A6E1: shikimate kinase 2 (EC 2.7.1.71) from Escherichia coli

 52% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4004835-4005455 (frame -2) on NC_008702.1 Azoarcus olearius, complete sequence
is similar to:		 PaperBLAST

A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii
Also see hits to annotated proteins above

 50% id,
99% cov

CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus
Also see hits to annotated proteins above

 34% id,
93% cov

SK2_ORYSJ / Q5NTH3: Shikimate kinase 2, chloroplastic; OsSK2; EC 2.7.1.71 from Oryza sativa
Q5NTH3: shikimate kinase (EC 2.7.1.71) from Oryza sativa
Also see hits to annotated proteins above

 33% id,
60% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory