Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanocella arvoryzae MRE50 (GCF_000063445.1)

Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanocella arvoryzae MRE50, or try another query

deoC RCI_RS11105 RCIX563 WP_012036534.1: deoxyribose-phosphate aldolase
is similar to:
PaperBLAST

DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis
Q877I0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Thermococcus kodakarensis

56% id,
100% cov

D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis

53% id,
99% cov

C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp.

53% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory