Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium etli CFN 42 (GCF_000092045.1)

Found 3 curated entries in PaperBLAST's database that match '1.1.1.368' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhizobium etli CFN 42, or try another query

RHE_RS05835 RHE_CH01141 WP_011424482.1: NAD(P)H-quinone oxidoreductase
is similar to:
PaperBLAST

HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica
had / O87871: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase subunit (EC 1.1.1.368) from Thauera aromatica
O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.1.1.368) from Thauera aromatica

24% id,
92% cov

RHE_RS23375 RHE_PC00105 WP_020922833.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica
had / O87871: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase subunit (EC 1.1.1.368) from Thauera aromatica
O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.1.1.368) from Thauera aromatica

35% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory