Searching in Rhizobium etli CFN 42 (GCF_000092045.1)
Found 23 curated entries in PaperBLAST's database that match '1.13.11.1' as complete word(s).
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Rhizobium etli CFN 42, or try another query
| RHE_RS11745 RHE_CH02298 WP_011425558.1: intradiol ring-cleavage dioxygenase is similar to: | PaperBLAST |
HQD2_CANAL / P86029: Catechol 1,2-dioxygenase; EC 1.13.11.1 from Candida albicans | 36% id, 90% cov |
HQDA_ASPNC / A2QAP8: Intradiol ring-cleavage dioxygenase hqdA; EC 1.13.11.1; EC 1.13.11.37 from Aspergillus niger | 35% id, 86% cov |
Q8G9L3: catechol 1,2-dioxygenase (EC 1.13.11.1) from Rhodococcus opacus | 29% id, 97% cov |
| pcaH RHE_RS24310 RHE_PE00057 WP_011427915.1: protocatechuate 3,4-dioxygenase subunit beta is similar to: | PaperBLAST |
PP_3713: Catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas putida | 32% id, 65% cov |
catA1: catechol 1,2-dioxygenase 1; EC 1.13.11.1 from Acinetobacter lwoffii | 32% id, 61% cov |
salD / Q0VH42: 4-methylcatechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas reinekei | 27% id, 74% cov |
| pcaG RHE_RS24305 RHE_PE00056 WP_011427914.1: protocatechuate 3,4-dioxygenase subunit alpha is similar to: | PaperBLAST |
Q8G9L3: catechol 1,2-dioxygenase (EC 1.13.11.1) from Rhodococcus opacus | 27% id, 60% cov |
Q8GAZ6: catechol 1,2-dioxygenase (EC 1.13.11.1) from Burkholderia sp. | 26% id, 57% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory